Optimizing current sources for tDCS with fewer sources than electrodes with a branch and bound algorithm
Guler, S., M. Dannhauer, B. Erem, R. MacLeod, D. M. Tucker, S. Turovets, P. Luu, W. Maleis and D. H. BrooksInternational Symposium on Biomedical Imaging,
2014
Geodesic Transcranial Electrical Neuromodulation (GTEN): Industry Lunch Symposium
Tucker, D. M., S. Turovets, E. Anderson and P. LuuOrganization for Human Brain Mapping. Hamburg, Germany,
Iontophoretic Conditioning of the Electrode to Skin Contacts
Govyadinov, P., A. Gunn, S. Turovets, D. Tucker and P. LuuThe 15th International Conference on Biomedical Applications of Electrical ImpedanceTomography (EIT 2014). Gananoque, Canada,
2012
Flow-based MRI and MR-EIT at ultra-low fields
Magnelind, P., E. Burmistrov, J. George, J. Gomez, A. Matlashov, D. Tucker, S. Turovets, A. Urbaitis, P. Volegov and M. EspyENC 2012 , 53rd Experimental Nuclear Magnetic Resonance Conference. Miami , FL, USA,
A pipeline for the simulation of transcranial direct current stimulation for realistic human head models using SCIRun/BioMesh3D
Dannhauer, M., D. Brooks, D. Tucker and R. MacLeodConf Proc IEEE Eng Med Biol Soc 2012: 5486-5489,
2011
Computational Modeling of Human Head Electromagnetics for Source Localization of Milliscale Brain Dynamics
Allen D. Malony, Adnan Salman, Sergei Turovets, Don Tucker, Vasily Volkov, Kai Li, Jung Eun Song, Scott Biersdorff, Colin Davey, Chris Hoge and David HammondAccepted to Medicine Meets Virtual Reality (MMVR),
Towards Subject Specific Head Models for Improved High-Resolution EEG
Turovets, S., Salman, A., Li, K., Malony, A., Tucker, DAnnual Meeting of the Organization for Human Brain Mapping,
Computational studies of NIRS using layered slab and MRI based head models
S. I. Turovets D. M. TuckerInternational Congress of Clinical Neurophysiology, Japan
Towards combined neuroimaging modalities: EEG and bounded EIT
S.I. Turovets, A. Salman, K. Li, A. Malony and D. M. TuckerInternational Congress of Clinical Neurophysiology, Japan
The MREI/EEG phantom experiments
Sergei Turovets, Young Tae Kim, Pavel Govyadinov, Eung Je Woo, and Don TuckerWorkshop on MR-based Impedance Imaging, Korea
2009
Development of Neural Electromagnetic Ontologies (NEMO): Representation and integration of event-related brain potentials
G. A. Frishkoff, D. Dou, R. M. Frank, P. LePendu and H. LiuInternational Conference on Biomedical Ontologies (ICBO09),
Bounded Electrical Impedance Tomography for Noninvasive Conductivity Estimation of Human Head Tissues
S. I. Turovets, P. Poolman, A. Salman, K. Li, A. Malony and D. M. TuckerElectrical Impedance Tomography Conference (EIT 2009),
An Open Domain-extensible Environment for Simulation-based Scientific Investigation (ODESSI)
A. Salman, A. Malony and M. SottileInternational Conference on Computational Science (ICCS 2009),
A 3D Vector-Additive Iterative Solver for the Anisotropic Inhomogeneous Poisson Equation in the Forward EEG problem
V. Volkov, A. Zherdetsky, S. I. Turovets and A. MalonyInternational Conference on Computational Science (ICCS 2009),
2008
Semantic data modeling: Methods for ontology-based queries and an application to brainwave data
P. LePendu, D. Dou, G. A. Frishkoff and J. RongInternational Conference on Scientific and Statistical Database Management (SSDBM-08),
Conductivity Analysis for High-Resolution EEG
S. I. Turovets, P. Poolman, A. Salman, A. Malony and D. M. TuckerInternational Conference on BioMedical Engineering and Informatics (BMEI),
On the Role of Skull Parcellation in the Computational Modeling of Human Head Conductivity
A. Salman, A. Malony, S. I. Turovets and D. M. TuckerElectrical Impedance Tomography Conference (EIT Conference 2008),
Instrumentation and Signal Processing for Low-frequency Bounded-EIT Studies of the Human Head
P. Poolman, S. I. Turovets, R. M. Frank, and G. S. RussellIEEE Instrumentation and Measurement Technology Conference,
Modified Lock-in Detection for Extraction of Impressed EEG Signals in Lowfrequency Bounded-EIT Studies of the Human Head
P. Poolman, R. M. Frank and S. I. TurovetsInternational Congress on Image and Signal Processing,
NIR Imaging of Labeled Human Neural Tissue: Computational Feasibility Studies
S. I. Turovets and D. M. TuckerBiomedical Optics, Optical Society of America Technical Digest,
2007
A semi-automatic framework for mining ERP patterns
J. Rong, D. Dou, G. A. Frishkoff, R. M. Frank, A. Malony and D. M. TuckerIEEE International Symposium on Data Mining and Information Retrieval (DMIR-07),
Development of NeuroElectroMagnetic Ontologies (NEMO): A framework for mining brain wave ontologies
D. Dou, G. A. Frishkoff, J. Rong, R. M. Frank, A. Malony and D. M. TuckerInternational Conference on Knowledge Discovery and Data Mining (KDD2007),
Use of Parallel Simulated Annealing for Computational Modeling of Human Head Conductivity
A. Salman, A. Malony, S. I. Turovets and D. M. TuckerInternational Conference on Computational Science (ICCS 2007), (best paper award)
2006
Parallel ICA Methods for EEG Neuroimaging
D. B. Keith, C. Hoge, R. M. Frank and A. D. MalonyIEEE International Parallel & Distributed Processing Symposium (IPDPS),
Anatomically Constrained Conductivity Estimation of the Human Head Tissues in Vivo: Computational Procedure and Preliminary Experiments
S. I. Turovets, A. Salman, A. Malony, J. Eriksen and D. M. Tucker7th Electrical Impedance Tomography (EIT) Conference,
Intracranial Hematoma Detection Using Near Infrared Light and Local Reference Method
S. I. Turovets, P. S. Lovely and D. M. TuckerOptical Society of America Biomedical Topical Meeting,
Automatic Brain MR Image Segmentation by Relative Thresholding and Morphological Image Analysis
K. Li, A. Malony, and D. M. TuckerInternational Conference on Computer Vision Theory and Applications (VISAPP),
A Multiscale Morphological Approach to Topology Correction of Cortical Surfaces
K. Li, A. Malony and D. M. TuckerInternational Workshop on Medical Imaging and Augmented Reality (MIAR),
2005
Multi-cluster, Mixed-mode Computational Modeling of Human Head Conductivity
A. Salman, S. I. Turovets, A. Malony and V. VolkovInternational Workshop on OpenMP (IWOMP), (best paper award)
Computational Modeling of Human Head Conductivity
A. Salman, S. I. Turovets, A. Malony, J. Eriksen and D. M. TuckerInternational Conference on Computational Science (ICCS 2005),
2004
A framework for evaluating ICA methods of artifact removal from multichannel EEG
K. Glass, G. A. Frishkoff, R. M. Frank, C. Davey, J. Dien, A. Malony and D. M. TuckerProceedings of ICA 2004 Conference, Granada, Spain
Journal Papers
2018
Skull modeling effects in conductivity estimates using parametric electrical impedance tomography
Fernández-Corazza, M., Turovets, S., Luu, P., Price, N., Muravchik, C.H., Tucker, D.IEEE Trans. Biomed. Eng. 65, 1785–1797,
Oscillatory Patterns of Phase Cone Formations near to Epileptic Spikes Derived from 256-Channel Scalp EEG Data
Ramon, C., M. D. Holmes, M. V. Wise, D. M. Tucker, K. Jenson and S. R. KinnComputational and Mathematical Methods in Medicine 2018: 14-29,
2017
Dynamic responses in brain networks to social feedback: A dual EEG acquisition study in adolescent couples
Kuo, C.-C., Ha, T., Ebbert, A.M., Tucker, D.M., Dishion, T.J.Front. Comput. Neurosci. 11,
Strategies for targeting deep brain structures using the TES reciprocity based methods
Fernandez-Corazza, M., S. Turovets, P. Luu, C. Muravchik and D. TuckerBrain Stimul. 10: 401,
2016
Optimization of focality and direction in dense electrode array transcranial direct current stimulation (tDCS)
Guler, S., Dannhauer, M., Erem, B., Macleod, R., Tucker, D., Turovets, S., Luu, P., Erdogmus, D., Brooks, D.H.J. Neural Eng. 13, 1–14,
Effects of head model inaccuracies on regional scalp and skull conductivity estimation using real EIT measurements
Fernández-Corazza, M., Turovets, S., Govyadinov, P., Muravchik, C.H., Tucker, D.IFMBE Proceedings. pp. 5–8,
Transcranial electrical neuromodulation based on the reciprocity principle
Fernández-Corazza, M., Turovets, S., Luu, P., Anderson, E., Tucker, D.Front. Psychiatry 7,
Slow-frequency pulsed transcranial electrical stimulation for modulation of cortical plasticity based on reciprocity targeting with precision electrical head modeling
Luu, P., Arumugam, E.M.E., Anderson, E., Gunn, A., Rech, D., Turovets, S., Tucker, D.M.Front. Hum. Neurosci. 10, 14,
Principal components of electrocortical activity during self-evaluation indicate depressive symptom severity
Waters, A. C. and D. M. TuckerSoc Cogn Affect Neurosci 11(8): 1335-1343,
BrainK for Structural Image Processing: Creating Electrical Models of the Human Head
Li, K., X. Papademetris and D. M. TuckerComput Intell Neurosci 2016: 1349851,
An improved artifacts removal method for high dimensional EEG
Hou, J., K. Morgan, D. M. Tucker, A. Konyn, C. Poulsen, Y. Tanaka, E. W. Anderson and P. LuuJ Neurosci Methods 268: 31-42,
2015
EEG source localization: Sensor density and head surface coverage
Song, J., Davey, C., Poulsen, C., Luu, P., Turovets, S., Anderson, E., Li, K., Tucker, D.J. Neurosci. Methods 256, 9–21,
Critical periods for the neurodevelopmental processes of externalizing and internalizing
Tucker, D. M., C. Poulsen and P. LuuDev Psychopathol 27(2): 321-346,
Clarifying the Mechanisms of Antidepressants
Tucker, D. M.Int J Neuropsychopharmacol,
Regulatory Considerations for the Clinical and Research Use of Transcranial Direct Current Stimulation (tDCS): review and recommendations from an expert panel
Fregni, F., M. A. Nitsche, C. K. Loo, A. R. Brunoni, P. Marangolo, J. Leite, S. Carvalho, N. Bolognini, W. Caumo, N. J. Paik, M. Simis, K. Ueda, H. Ekhitari, P. Luu, D. M. Tucker, W. J. Tyler, J. Brunelin, A. Datta, C. H. Juan, G. Venkatasubramanian, P. SClin Res Regul Aff 32(1): 22-35,
2014
General hybrid parallel profiling
Malony, A.D., Huck, K.A.Proceedings - 2014 22nd Euromicro International Conference on Parallel, Distributed, and Network-Based Processing, PDP 2014. pp. 204–212,
Sensor density and head surface coverage in EEG source localization
Song, J., Davey, C., Poulsen, C., Turovets, S., Luu, P., Tucker, D.M.2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014. pp. 620–623,
Localizing movement-related primary sensorimotor cortices with multi-band EEG frequency changes and functional MRI
Kuo, C.-C., Luu, P., Morgan, K.K., Dow, M., Davey, C., Song, J., Malony, A.D., Tucker, D.M.PLoS One 9,
Future human brain neuroimaging and high-performance computing
Salman, A., A. Malony, S. Turovets, B. Volkov, D. Ozog and D. M. TuckerCONCURRENCY AND COMPUTATION: PRACTICE AND EXPERIENCE: 1-23,
Time-course of cortical networks involved in working memory
Luu, P., D. M. Caggiano, A. Geyer, J. Lewis, J. Cohn and D. M. TuckerFront Hum Neurosci 8: 4,
2013
Graph diffusion distance: A difference measure for weighted graphs based on the graph Laplacian exponential kernel
Hammond, D.K., Gur, Y., Johnson, C.R.2013 IEEE Global Conference on Signal and Information Processing, GlobalSIP 2013 - Proceedings. pp. 419–422,
Automated measurement of skull circumference, cranial index, and braincase volume from pediatric computed tomography
Smith, K., Politte, D., Reiker, G., Nolan, T.S., Hildebolt, C., Mattson, C., Tucker, D., Prior, F., Turovets, S., Larson-Prior, L.J.Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. pp. 3977–3980,
Dense array EEG source estimation in neocortical epilepsy
Yamazaki, M., D. M. Tucker, M. Terrill, A. Fujimoto and T. YamamotoFront Neurol 4: 42,
Positive and negative affect in adolescent self-evaluation: psychometric information in single trials used to generate dimension-specific ERPs and neural source models
Waters, A. C. and D. M. TuckerPsychophysiology 50(6): 538-549,
Anatomically Accurate Head Models and Their Derivatives for Dense Array EEG Source Localization
Song, J., K. Morgan, S. Turovets, K. Li, C. Davey, P. Govyadinov, P. Luu, K. Smith, F. Prior, L. Larson-Prior and D. TuckerFunctional Neurology Rehabilitation and Ergonomics 3: 275-293,
Image segmentation method
Li, K., A. D. Malony and D. M. TuckerUS Pat. No. 8,478,011. United States, Cerebral Data Systems,
2012
Sharing and integration of cognitive neuroscience data: Metric and pattern matching across heterogeneous ERP datasets
Liu, H., Frishkoff, G., Frank, R., Dou, D.Neurocomputing 92, 156–169,
Incorporating anatomical connectivity into EEG source estimation via sparse approximation with cortical graph wavelets
Hammond, D.K., Scherrer, B., Malony, A.ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings. pp. 573–576,
Automated measurement of pediatric cranial bone thickness and density from clinical computed tomography
Smith, K., Politte, D., Reiker, G., Nolan, T.S., Hildebolt, C., Mattson, C., Tucker, D., Prior, F., Turovets, S., Larson-Prior, L.J.Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. pp. 4462–4465,
Comparison of dense array EEG with simultaneous intracranial EEG for interictal spike detection and localization
Yamazaki, M., D. M. Tucker, A. Fujimoto, T. Yamazoe, T. Okanishi, T. Yokota, H. Enoki and T. YamamotoEpilepsy Res 98(2-3): 166-173,
Integrating dense array EEG in the presurgical evaluation of temporal lobe epilepsy
Yamazaki, M., M. Terrill, A. Fujimoto, T. Yamamoto and D. M. TuckerISRN Neurol 2012: 924081,
The importance of single trials: temporal and spatial resolution in event-related potential research
Waters, A. C., J. E. Song, P. Luu and D. M. TuckerDev Neuropsychol 37(6): 545-558,
Cognition and Neural Development
Tucker, D. M. and P. LuuNew York, Oxford University Press,
A novel hydrogel electrolyte extender for rapid application of EEG sensors and extended recordings." Journal of Neuroscience Methods 206: 83-87.
Kleffner-Canucci, K., P. Luu, J. Naleway and D. M. TuckerJournal of Neuroscience Methods 206: 83-87,
2011
Wavelets on graphs via spectral graph theory
Hammond, D.K., Vandergheynst, P., Gribonval, R.Appl. Comput. Harmon. Anal. 30, 129–150,
Minimal Information for Neural Electromagnetic Ontologies (MINEMO): A standards-compliant method for analysis and integration of event-related potentials (ERP) data
Frishkoff, G., Sydes, J., Mueller, K., Frank, R., Curran, T., Connolly, J., Kilborn, K., Molfese, D., Perfetti, C., Malony, A.Stand. Genomic Sci. 5, 211–223,
Computational modeling of human head electromagnetics for source localization of milliscale brain dynamics
Malony, A.D., Salman, A., Turovets, S., Tucker, D., Volkov, V., Li, K., Song, J.E., Biersdorff, S., Davey, C., Hoge, C., Hammond, D.Studies in Health Technology and Informatics. pp. 329–335,
Learning and the development of contexts for action
Luu, P., Z. Jiang, C. Poulsen, C. Mattson, A. Smith and D. M. TuckerFront Hum Neurosci 5: 159,
2010
Instrumentation for Low Frequency EIT Studies of the Human Head and its Validation in the Phantom Experiments
B. Esler, T. Lyons, S. I. Turovets and D. TuckerJournal of Physics: Conference Series,
A fast BiCG solver for the isotropic Poisson equation in the forward EIT problem in cylinder phantoms
V. Volkov, A. Zherdetsky, S. I. Turovets and A. MalonyJournal of Physics: Conference Series,
Ontology-based mining of brainwaves: A sequence similarity technique for mapping alternative features in event-related potentials (ERP) data
Liu, H., Frishkoff, G., Frank, R., Dou, D.Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics),
Operational brain dynamics: Data fusion technology for neurophysiological, behavioral, and scenario context information in operational environments
Tucker, D.M., Luu, P.Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics),
Directed components analysis: An analytic method for the removal of biophysical artifacts from EEG data
Luu, P., Frank, R., Kerick, S., Tucker, D.M.Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics),
A 3D vector-additive iterative solver for the anisotropic inhomogeneous poisson equation in the forward eeg problem
Volkov, V., Zherdetsky, A., Turovets, S., Malony, A.Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics),
Microgenesis of Language: Vertical Integration of Linguistic Mechanisms Across the Neuraxis
Tucker, D.M., Frishkoff, G., Luu, P.Handbook of the Neuroscience of Language,
Modified lock-in detection for extraction of impressed EEG signals in low-frequency bounded-EIT studies of the human head
Poolman, P., Frank, R.M., Turovets, S.I.Proceedings - 1st International Congress on Image and Signal Processing, CISP 2008. pp. 174–183,
Instrumentation and signal processing for low-frequency bounded-EIT studies of the human head
Poolman, P., Turovets, S.I., Frank, R.M., Russell, G.S.Conference Record - IEEE Instrumentation and Measurement Technology Conference. pp. 602–606,
NIR imaging of labeled human neural tissue: Computational feasibility studies
Turovets, S.I., Tucker, D.M.Biomedical Optics, BIOMED 2008,
Rejection sensitivity relates to hypocortisolism and depressed mood state in young women
Tops, M., Riese, H., Oldehinkel, A.J., Rijsdijk, F.V., Ormel, J.Psychoneuroendocrinology 33, 551–559,
A single-trial analytic framework for EEG analysis and its application to target detection and classification
Poolman, P., Frank, R.M., Luu, P., Pederson, S.M., Tucker, D.M.Neuroimage 42, 787–798,
A framework to support automated ERP pattern classification and labeling
G. A. Frishkoff, R. M. Frank, J. Rong, D. Dou, J. Dien and L. HaldermanComputational Intelligence and Neuroscience,
Automated protocol for evaluation of electromagnetic component separation (APECS): Application of a framework for evaluating statistical methods of blink extraction from multichannel EEG
R. M. Frank and G. A. FrishkoffClinical Neurophysiology,
2006
Noninvasive conductivity extraction for high-resolution EEG source localization
A. Salman, S. I. Turovets, A. Malony, P. Poolman, C. Davey, J. Eriksen, and D. M. TuckerAdvances in Clinical Neuroscience and Rehabilitation, 6(1), pp. 27-28,
Changes in P3b Latency and Amplitude Reflect Expertise Acquisition in a Football Visuomotor Learning Task
Morgan, K. K., P. Luu and D. M. TuckerPLoS One 11(4): e0154021 2016
PhD Theses
A Software Framework for Simulation-based Scientific Investigations
A. SalmanPhD thesis, University of Oregon, Dept. Computer and Information Science,
Neuroanatomical Segmentation in MRI Exploiting A Priori Knowledge
Kai LiPhD thesis, University of Oregon, Dept. Computer and Information Science,
Presented Posters
Cortical Graph Smoothing Priors for EEG Source Localization
David K. Hammond, Allen D. Malony and Don TuckerNorthwest Computational Neuroscience Connection, Seattle,
Source Localization of Dense Array EEG for Brain Dynamics
J. Song, S. Turovets, D. Tucker, P. Luu and C. DaveyWorkshop on MR-based Impedance Imaging, Korea
A Matlab based solver for the MREIT forward problem
V.M. Volkov, A.A. Zherdetskij, S.I. Turovets, and A.D. MalonyWorkshop on MR-based Impedance Imaging, Korea
Modeling Human Head Electromagnetics on the Cell Broadband Engine
A. Salman, A. Malony, S. I. Turovets, A. Morris, and D. M. TuckerWorkshop on Solving Computational Challenges in Medical Imaging, Seattle,
Finite Elements and Finite Difference Human Head Modeling: Forward Problem
S. Turovets, K. Glass, A. Malony, V. VolkovTelemedicine Advanced Technology Research Center (TATRC) Meeting, University of Oregon, Eugene, Oregon,
Automated Protocol for ERP Component Separation (APECS): Effects of Spatial Sampling on Blink Removal using Independent Components Analysis
R. M. Frank, G. A. Frishkoff and J. Dien
